5.2 Potential energy surfaces and their characteristics
4 min read•august 9, 2024
The lets us separate electronic and nuclear motion, paving the way for potential energy surfaces (PES). These surfaces map out how a molecule's energy changes with its geometry, helping us visualize and understand chemical reactions.
PES are crucial for grasping reaction mechanisms and molecular behavior. They show us stable structures, transition states, and energy barriers. By studying PES, we can predict reaction rates, understand spectroscopy, and explore how molecules change shape and energy during chemical processes.
Potential Energy Surface Fundamentals
Defining Potential Energy Surfaces
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Free energy landscape of G-protein coupled receptors, explored by accelerated molecular dynamics ... View original
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Accurate potential energy surfaces for the first two lowest electronic states of the Li (2p ... View original
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DFT calculation of the potential energy landscape topology and Raman spectra of type I CH 4 and ... View original
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Free energy landscape of G-protein coupled receptors, explored by accelerated molecular dynamics ... View original
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Accurate potential energy surfaces for the first two lowest electronic states of the Li (2p ... View original
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Top images from around the web for Defining Potential Energy Surfaces
Free energy landscape of G-protein coupled receptors, explored by accelerated molecular dynamics ... View original
Is this image relevant?
Accurate potential energy surfaces for the first two lowest electronic states of the Li (2p ... View original
Is this image relevant?
DFT calculation of the potential energy landscape topology and Raman spectra of type I CH 4 and ... View original
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Free energy landscape of G-protein coupled receptors, explored by accelerated molecular dynamics ... View original
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Accurate potential energy surfaces for the first two lowest electronic states of the Li (2p ... View original
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represents the relationship between molecular geometry and energy
Maps out energy landscape for chemical reactions and molecular dynamics
Typically plotted as a multidimensional graph with molecular coordinates on x and y axes, energy on z-axis
Allows visualization of energy changes during chemical processes (bond breaking, formation, isomerization)
describes the progress of a chemical reaction on the PES
Usually represents the primary geometric change occurring during the reaction
Can be a single , angle, or a more complex combination of coordinates
Equilibrium geometry corresponds to stable molecular configurations on the PES
Represented by on the surface
Indicates structures with balanced forces and lowest potential energy
Navigating the Energy Landscape
traces the lowest energy route between reactants and products on the PES
Represents the most likely
Follows the path of least resistance through the energy landscape
on the PES indicate critical points in the reaction progress
First-order saddle points often represent transition states
Higher-order saddle points may indicate more complex reaction mechanisms
PES topology provides insights into reaction mechanisms and molecular behavior
Steep slopes indicate rapid energy changes with small geometric alterations
Flat regions suggest conformational flexibility or multiple similar energy states
Multidimensional PES can be simplified through projection or slicing techniques
2D contour plots show energy as a function of two key coordinates
1D energy profiles along the reaction coordinate offer a simplified view of the reaction progress
Transition States and Barriers
Understanding Transition States
represents the highest energy point along the reaction coordinate
Corresponds to the most unstable molecular configuration during the reaction
Characterized by a first-order saddle point on the PES
Transition state theory uses properties of the transition state to predict reaction rates
Assumes quasi-equilibrium between reactants and transition state
Rate constant depends on the energy difference between reactants and transition state
Transition state structures often exhibit partially formed or broken bonds
Bond lengths and angles intermediate between reactants and products
Vibrational analysis shows one imaginary frequency along the reaction coordinate
Analyzing Reaction Barriers
Reaction barrier refers to the energy difference between reactants and transition state
Determines the activation energy required for the reaction to proceed
Influences reaction rate and feasibility under given conditions
Early and late transition states affect the shape of the energy profile
Early transition states resemble reactants and occur for exothermic reactions
Late transition states resemble products and are common in endothermic reactions
Hammond's postulate relates transition state structure to the energy profile
States that transition state resembles the species closest to it in energy
Helps predict transition state properties based on reactant and product energies
Conical intersections occur where two electronic states have the same energy
Allow for ultrafast non-radiative transitions between electronic states
Play crucial roles in photochemical reactions and excited state dynamics
Electronic State Interactions
Diabatic and Adiabatic State Representations
Diabatic states maintain their electronic character as nuclear coordinates change
Represent "pure" electronic states without mixing
Often used to describe charge transfer processes or excited state dynamics
Adiabatic states result from diagonalizing the electronic Hamiltonian
Represent the true eigenstates of the molecular system
Exhibit avoided crossings where diabatic states would intersect
Transformation between diabatic and adiabatic representations
Allows for different perspectives on electronic structure and dynamics
Diabatic representation often simplifies the description of non-adiabatic processes
Non-adiabatic couplings describe interactions between different electronic states
Become important in regions where adiabatic states approach each other
Lead to breakdown of the Born-Oppenheimer approximation
Franck-Condon Principle and Spectroscopy
Franck-Condon principle describes the intensity of vibronic transitions
States that electronic transitions occur faster than nuclear motion
Vertical transitions on the PES represent the most probable electronic excitations
Franck-Condon factors quantify the overlap between vibrational wavefunctions
Determine the relative intensities of vibrational bands in electronic spectra
Calculated as the square of the overlap integral between initial and final vibrational states
Applications in spectroscopy and photochemistry
Explains the shape and intensity distribution of absorption and emission spectra
Predicts the most likely excited state geometries following photon absorption
Condon approximation assumes electronic transition moment is independent of nuclear coordinates
Simplifies calculations of transition probabilities
Breaks down for some systems, requiring more advanced treatments