💻Intro to Programming in R Unit 16 – Linear Regression Models
Linear regression models are powerful tools for understanding relationships between variables and making predictions. They help us quantify how changes in one or more independent variables affect a dependent variable, allowing us to uncover patterns and trends in data.
This unit covers the basics of linear regression, from setting up R and building models to interpreting results and checking assumptions. We'll explore key concepts, learn how to improve models, and see real-world applications of this versatile statistical technique.
Linear regression is a statistical modeling technique used to examine the relationship between a dependent variable and one or more independent variables
Aims to find the best-fitting linear equation that describes the relationship between the variables
The equation takes the form y=β0+β1x1+β2x2+...+βnxn+ϵ, where:
y is the dependent variable
β0 is the y-intercept (value of y when all independent variables are 0)
β1,β2,...,βn are the coefficients for each independent variable
x1,x2,...,xn are the independent variables
ϵ is the error term (represents the variation in y not explained by the model)
Can be used for both simple linear regression (one independent variable) and multiple linear regression (two or more independent variables)
Helps predict the value of the dependent variable based on the values of the independent variables
Useful for identifying the strength and direction of the relationship between variables (positive or negative correlation)
Setting Up R for Linear Regression
Install and load the necessary packages for linear regression analysis, such as
stats
(included in base R) and
lm.beta
Ensure your data is in a suitable format for analysis, typically a data frame with columns representing variables
Use the
read.csv()
or
read.table()
functions to import your data into R from a CSV or text file
Check for missing values in your dataset using functions like
is.na()
or
complete.cases()
Handle missing values by removing rows with missing data (
na.omit()
) or imputing values (e.g., using the mean or median)
Explore your data using summary statistics and visualizations to gain insights and identify potential issues
Use
summary()
to view descriptive statistics for each variable
Create scatterplots using
plot()
to visualize the relationship between the dependent and independent variables
If needed, transform variables to meet the assumptions of linear regression (e.g., log transformations for skewed data)
Key Concepts in Linear Regression
Dependent variable (response variable) is the variable you want to predict or explain
Independent variables (predictor variables) are the variables used to predict or explain the dependent variable
Coefficients represent the change in the dependent variable for a one-unit change in the corresponding independent variable, holding other variables constant
R-squared (R2) measures the proportion of variance in the dependent variable explained by the independent variables
Ranges from 0 to 1, with higher values indicating a better fit
Adjusted R-squared adjusts the R-squared value based on the number of independent variables in the model
Useful for comparing models with different numbers of predictors
P-values indicate the statistical significance of each coefficient in the model
A small p-value (typically < 0.05) suggests that the coefficient is significantly different from zero
Residuals are the differences between the observed values of the dependent variable and the predicted values from the model
Used to assess the model's assumptions and goodness of fit
model <- lm(sales ~ advertising + price, data = sales_data)
Include the
data
argument to specify the data frame containing the variables
Assign the model to an object (e.g.,
model
) for later use
View the model summary using
summary(model)
to see the coefficients, p-values, and other key statistics
Interpret the coefficients as the change in the dependent variable for a one-unit change in the corresponding independent variable, holding other variables constant
Assess the model's performance by comparing the predicted values to the actual values of the dependent variable
Interpreting Model Results
Examine the model summary output to interpret the results
Check the p-values for each coefficient to determine if they are statistically significant
A p-value less than 0.05 indicates that the coefficient is significantly different from zero at the 5% level
Interpret the coefficients as the change in the dependent variable for a one-unit change in the corresponding independent variable, holding other variables constant
Example: If the coefficient for advertising is 0.5, a one-unit increase in advertising is associated with a 0.5-unit increase in sales, holding other variables constant
Look at the R-squared and adjusted R-squared values to assess the model's goodness of fit
Higher values indicate that the model explains a larger proportion of the variance in the dependent variable
Examine the residual standard error to understand the average deviation of the observed values from the predicted values
Check the F-statistic and its associated p-value to determine if the overall model is statistically significant
Use the
confint()
function to calculate confidence intervals for the coefficients
Example:
confint(model, level = 0.95)
provides 95% confidence intervals
Checking Model Assumptions
Linear regression relies on several assumptions that must be met for the model to be valid and reliable
Linearity assumes a linear relationship between the dependent variable and independent variables
Check linearity using scatterplots of the dependent variable against each independent variable
Look for a roughly linear pattern in the plots
Independence of errors assumes that the residuals are not correlated with each other
Check for autocorrelation using the Durbin-Watson test (
durbinWatsonTest()
from the
car
package)
Values close to 2 indicate no autocorrelation, while values close to 0 or 4 suggest positive or negative autocorrelation, respectively
Homoscedasticity assumes that the variance of the residuals is constant across all levels of the independent variables
Check homoscedasticity using a scatterplot of the residuals against the predicted values
Look for a roughly even spread of residuals across the range of predicted values
Normality assumes that the residuals are normally distributed
Check normality using a histogram or QQ plot of the residuals
Look for a roughly bell-shaped distribution in the histogram or a straight line in the QQ plot
Multicollinearity occurs when independent variables are highly correlated with each other
Check for multicollinearity using the variance inflation factor (VIF) for each independent variable
VIF values greater than 5 or 10 indicate potential multicollinearity issues
Improving Your Model
Identify and remove outliers that may be influencing the model results
Use scatterplots and residual plots to visually identify potential outliers
Consider removing or adjusting extreme values that are not representative of the overall pattern
Handle missing data appropriately to avoid bias in the model
Use techniques like listwise deletion (removing rows with missing values) or imputation (replacing missing values with estimated values)
Transform variables if necessary to meet the assumptions of linear regression
Apply log transformations to variables with skewed distributions
Standardize or scale variables to ensure they are on a similar scale
Consider adding interaction terms to capture the combined effect of two or more independent variables
Example:
model <- lm(sales ~ advertising + price + advertising:price, data = sales_data)
Use feature selection techniques to identify the most important variables for the model
Stepwise regression (forward, backward, or both) can help select a subset of variables based on their contribution to the model
Regularization methods like lasso or ridge regression can shrink the coefficients of less important variables towards zero
Validate the model using techniques like cross-validation or holdout validation
Split the data into training and testing sets to assess the model's performance on unseen data
Use metrics like mean squared error (MSE) or root mean squared error (RMSE) to evaluate the model's predictive accuracy
Real-World Applications
Predicting house prices based on features like square footage, number of bedrooms, and location