-10 Sequence

Definition

The -10 sequence is a conserved DNA sequence found in the promoter region of bacterial genes that is crucial for the initiation of transcription. It is recognized by the sigma subunit of the RNA polymerase enzyme, allowing for the binding and subsequent unwinding of the DNA double helix to facilitate the start of mRNA synthesis.

5 Must Know Facts For Your Next Test

1. The -10 sequence is typically located approximately 10 base pairs upstream of the transcription start site and has the consensus sequence of 'TATAAT'.
2. The binding of the sigma factor to the -10 sequence helps to unwind the DNA double helix, exposing the template strand for RNA polymerase to initiate transcription.
3. The -10 sequence is one of the key elements recognized by the bacterial RNA polymerase holoenzyme, along with the -35 sequence, to ensure accurate and efficient transcription initiation.
4. Mutations or alterations in the -10 sequence can significantly impact the efficiency of transcription initiation, leading to changes in gene expression.
5. The -10 sequence is a highly conserved feature across bacterial species, indicating its critical role in the fundamental process of transcription.

Review Questions

• Describe the role of the -10 sequence in the initiation of transcription in bacterial cells.
  • The -10 sequence is a crucial DNA element located in the promoter region of bacterial genes that is recognized by the sigma subunit of the RNA polymerase enzyme. This recognition allows the RNA polymerase to bind to the promoter and unwind the DNA double helix, exposing the template strand and enabling the initiation of mRNA synthesis. The -10 sequence, with its conserved 'TATAAT' consensus sequence, is one of the key signals that the RNA polymerase holoenzyme uses to accurately locate the transcription start site and begin the transcription process.
• Explain how the -10 sequence and the sigma factor work together to facilitate transcription initiation in bacteria.
  • The sigma factor is a subunit of the bacterial RNA polymerase enzyme that is responsible for recognizing and binding to specific DNA sequences, such as the -10 sequence, in the promoter region of genes. When the sigma factor binds to the -10 sequence, it helps to unwind the DNA double helix, exposing the template strand for the RNA polymerase to begin transcription. This interaction between the sigma factor and the -10 sequence is crucial for the accurate positioning of the RNA polymerase at the transcription start site and the efficient initiation of mRNA synthesis. The sigma factor acts as a molecular 'gatekeeper,' ensuring that transcription only occurs at the appropriate genomic locations.
• Discuss the potential impact of mutations or alterations in the -10 sequence on gene expression and bacterial physiology.
  • Changes or mutations in the -10 sequence can have significant consequences on the efficiency of transcription initiation and, ultimately, the expression of the associated gene. If the -10 sequence is altered, the sigma factor may have difficulty recognizing and binding to the promoter region, which could lead to a decrease or complete disruption of transcription. This, in turn, would result in reduced mRNA synthesis and, consequently, lower levels of the encoded protein. Such changes in gene expression can have far-reaching effects on bacterial physiology, as the affected genes may be involved in essential cellular processes, metabolic pathways, or stress responses. Understanding the critical role of the -10 sequence in transcription initiation is crucial for understanding gene regulation and the potential impact of genetic modifications in bacterial systems.

Related terms

Promoter: A DNA sequence located upstream of a gene that serves as a binding site for RNA polymerase, enabling the initiation of transcription.

Sigma Factor: A subunit of the bacterial RNA polymerase enzyme that recognizes and binds to specific DNA sequences, such as the -10 sequence, to initiate transcription.

Transcription Initiation: The process by which RNA polymerase binds to the promoter region of a gene and begins the synthesis of a complementary RNA molecule (mRNA) using the DNA as a template.